BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B02LP1|AL427255
(705 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1418 1379 0.0
>3x_Contig1418
Length = 8644
Score = 1379 bits (693), Expect = 0.0
Identities = 700/705 (99%)
Strand = Plus / Plus
Query: 1 atccaatcaaaaaagtagcaaggtatgaaaggatacagttcgcctcttctataactttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 atccaatcaaaaaagtagcaaggtatgaaaggatacagttcgcctcttctataactttga 2487
Query: 61 agaaaactagytaacaaaatagacggttttcacttttagtggttttaggctgctatgtga 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 agaaaactagccaacaaaatagacggttttcacttttagtggttttaggctgctatgtga 2547
Query: 121 agggaagacatgacggtattcagcagtcatcaccttatcatgaattggatcattatgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 agggaagacatgacggtattcagcagtcatcaccttatcatgaattggatcattatgatg 2607
Query: 181 aagagactgacatgacgtttgttccaattctaatggagaagacgccgcctctcataataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 aagagactgacatgacgtttgttccaattctaatggagaagacgccgcctctcataataa 2667
Query: 241 gaggaagatctccctctaactattgccaacaaatcaaagtcatgcataccaagaaatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 gaggaagatctccctctaactattgccaacaaatcaaagtcatgcataccaagaaatcag 2727
Query: 301 attttgataatggttccccacaagaaaacgatcttgatgtgccagctgataagaaagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2728 attttgataatggttccccacaagaaaacgatcttgatgtgccagctgataagaaagagc 2787
Query: 361 ggaaaaggcgaggacgaaaaagtaagcaaccagatcttaaaactactgcaaatgtgtctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2788 ggaaaaggcgaggacgaaaaagtaagcaaccagatcttaaaactactgcaaatgtgtctc 2847
Query: 421 acgatagcgctggtcgaatcccaacacttctaaccaatggattgccgtccacattcgawa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2848 acgatagcgctggtcgaatcccaacacttctaaccaatggattgccgtccacattcgaaa 2907
Query: 481 tatcaccgactagtggtaacatgagaattaagaatatacaactgcactcgtcaagcactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2908 tatcaccgactagtggtaacatgagaattaagaatatacaactgcactcgtcaagcactg 2967
Query: 541 agacctcatttccaagaggtttccaatctgagtyattgtcagtagcatatttcagtaaca 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2968 agacctcatttccaagaggtttccaatctgagtcattgtcagtagcatatttcagtaaca 3027
Query: 601 gtgccactcccatacaagactcgatttttaagaagagaagacttaatattagtwaacctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3028 gtgccactcccatacaagactcgatttttaagaagagaagacttaatattagtaaacctg 3087
Query: 661 ttgtactggagtcaaaccttgaagaaccgctggatgacattacag 705
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3088 ttgtactggagtcaaaccttgaagaaccgctggatgacattacag 3132
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4820
Number of Sequences: 1807
Number of extensions: 4820
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 705
length of database: 10,358,551
effective HSP length: 16
effective length of query: 689
effective length of database: 10,329,639
effective search space: 7117121271
effective search space used: 7117121271
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)